slimfinder: 20 Seq, 16 UPC, 8 Sig SLiMs in 3 Clouds Cloud 1 (6 SLiMs): D..[IL]DL DL[ST].[KR] P[IL]DL P.DL P.DL..[KR] P.DLS.[KR] (p = 0.005) 8 UPC 12 Seq: ATX1L_HUMAN__P0C7T5 BRCA1_HUMAN__P38398 CBX4_HUMAN__O00257 COM1_HUMAN__Q99708 HIC1_HUMAN__Q14526 IKZF1_HUMAN__Q13422 LCORL_HUMAN__Q8N3X6 LCOR_HUMAN__Q96JN0 NOL4L_HUMAN__Q96MY1 NRIP1_HUMAN__P48552 SOBP_HUMAN__A7XYQ1 ZN219_HUMAN__Q9P2Y4 SLiMMaker Consensus: [PV].DL - SLiM matches 16 of 18 sequences (88.9%). DEPIDLRCV DGVIDLTVG DKPLDLSDR DGVLDLSTK DSPLDLTVR DGVLDLSTK DGELDLQRY LCGLDLSKK NGPTDLSMK CVPIDLSCK AEPLDLSLR SEVVDLTRR TQPLDLAPG EDPKDLMLS PIPEDLSTT EGPLDLTVN SSPVDLKIP PQPPDLGLL Cloud 2 (1 SLiMs): V.{0,2}QL (p = 0.086) 8 UPC 8 Seq: BRCA1_HUMAN__P38398 CHD3_HUMAN__Q12873 COM1_HUMAN__Q99708 ITF2_HUMAN__P15884 LCORL_HUMAN__Q8N3X6 NOL4L_HUMAN__Q96MY1 NRIP1_HUMAN__P48552 SOBP_HUMAN__A7XYQ1 SLiMMaker Consensus: V[LQ][LQ] - SLiM matches 5 of 9 sequences (55.6%). VQLSN VQLKI VQLLT VLQLN VPQLP VRQLI VLQLL VLNQL VLKQL Cloud 3 (1 SLiMs): I.D..F (p = 0.093) 4 UPC 4 Seq: BRCA1_HUMAN__P38398 CHD3_HUMAN__Q12873 KAT2B_HUMAN__Q92831 LCOR_HUMAN__Q96JN0 SLiMMaker Consensus: I.D..F - SLiM matches 4 of 4 sequences (100.0%). IEDKIF IADGGF IWDQDF ISDLPF #Cloud Seq coverage/overlap Cloud Dataset 1 2 3 1:D..[IL]DL 0.600 1.000 0.750 0.500 2:V.{0,2}QL 0.400 0.500 1.000 0.500 3:I.D..F 0.200 0.167 0.250 1.000 #Probabilities of motif clouds overlapping Seq this much or more Cloud Dataset 1 2 3 1:D..[IL]DL 1.000 0.002 0.325 0.773 2:V.{0,2}QL 1.000 0.325 0.001 0.511 3:I.D..F 1.000 0.773 0.511 0.002 #Probabilities of motif clouds overlapping Seq this little or less Cloud Dataset 1 2 3 1:D..[IL]DL 1.000 1.000 0.868 0.542 2:V.{0,2}QL 1.000 0.868 1.000 0.809 3:I.D..F 1.000 0.542 0.809 1.000 #Cloud UPC coverage/overlap Cloud Dataset 1 2 3 1:D..[IL]DL 0.500 1.000 0.750 0.500 2:V.{0,2}QL 0.500 0.750 1.000 0.750 3:I.D..F 0.250 0.250 0.375 1.000 #Probabilities of motif clouds overlapping UPC this much or more Cloud Dataset 1 2 3 1:D..[IL]DL 1.000 0.004 0.145 0.660 2:V.{0,2}QL 1.000 0.145 0.004 0.317 3:I.D..F 1.000 0.660 0.317 0.004 #Probabilities of motif clouds overlapping UPC this little or less Cloud Dataset 1 2 3 1:D..[IL]DL 1.000 1.000 0.965 0.683 2:V.{0,2}QL 1.000 0.965 1.000 0.912 3:I.D..F 1.000 0.683 0.912 1.000