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Alias Data for orthdb=$ALIAS

$DATAPATH=/srv/slimsuite/data/orthdb/
$QFOPATH=/srv/slimsuite/data/orthdb/qfo_ref.2015-04/
$UNIPATH=/srv/slimsuite/data/orthdb/uniprot.2015-05/
$ALIAS=$DATAPATH$ALIAS.fas
$ALIAS=$QFOPATH$ALIAS.fas
$ALIAS=$QFOPATH$ALIAS.2015-04.Eukaryota.fas
$ALIAS=$UNIPATHuniprot.$ALIAS.complete.2015-05-19.dat.fas

Aliases

qfo qfo_ref.2013

/srv/slimsuite/data/orthdb/*.fas

qfo_ref.2013-04/qfo.Eukaryota qfo_ref.2013-04/qfo.Metazoa qfo_ref.2013-04/qfo_ref.2013-04.all qfo_ref.2015-04/qfo_ref.2015-04.Eukaryota uniprot.2015-05/uniprot.archaea.complete.2015-05-19.dat uniprot.2015-05/uniprot.bacteria.complete.2015-05-19.dat uniprot.2015-05/uniprot.viruses.complete.2015-05-19.dat

/srv/slimsuite/data/orthdb/qfo_ref.2015-04/*.2015-04.Eukaryota.fas

qfo_ref

/srv/slimsuite/data/orthdb/qfo_ref.2015-04/*.fas

qfo_ref.2015-04.Eukaryota

/srv/slimsuite/data/orthdb/uniprot.2015-05/uniprot.*.complete.2015-05-19.dat.fas

archaea bacteria viruses


© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.