SLiMSuite REST Server


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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: alndir

Option Type: PATH

Modules: slimjim slim_pickings rje_motiflist rje_slimcalc rje_slimlist presto_V5


ModuleOptionDescriptionDefault
presto_V5 alndir=PATH Path to alignments of proteins containing motifs ./
rje_motiflist alndir=PATH Path to alignments of proteins containing motifs ./
rje_slimcalc alndir=PATH Path to pre-made alignment files ./
rje_slimlist alndir=PATH Path to alignments of proteins containing motifs ./
slim_pickings alndir=PATH Path to alignments of proteins containing motifs [./] * Use forward slashes (/) Gopher/ALN/
slimjim alndir=PATH Path to orthologue alignments for those missing mapping.fas

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.