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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: ambcut
Option Type: X
Modules: rje_motiflist rje_motif_V3 rje_slimlist rje_slim comparimotif_V3 presto_V5
| Module | Option | Description | Default |
|---|---|---|---|
| comparimotif_V3 | ambcut=X |
Max number of choices in ambiguous position before replaced with wildcard (0=use all) | 10 |
| presto_V5 | ambcut=X |
Cut-off for max number of choices in ambiguous position to be shown as variant | 10 |
| rje_motif_V3 | ambcut=X |
Cut-off for max number of choices in ambiguous position to be shown as variant (0=All) | 10 |
| rje_motiflist | ambcut=X |
Cut-off for max number of choices in ambiguous position to be shown as variant | 10 |
| rje_slim | ambcut=X |
Cut-off for max number of choices in ambiguous position to be shown as variant (0=All) | 10 |
| rje_slimlist | ambcut=X |
Cut-off for max number of choices in ambiguous position to be shown as variant | 10 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.