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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: blastcut
Option Type: X
Modules: budapest fiesta haqesac multihaq
| Module | Option | Description | Default |
|---|---|---|---|
| budapest | blastcut=X |
Reduced the number of sequences in HAQESAC runs to X (0 = no reduction) | 50 |
| fiesta | blastcut=X |
Reduced the number of sequences in HAQESAC runs to X (0 = no reduction) | 50 |
| haqesac | blastcut=X |
Maximum number of sequences to have in dataset (BLAST query against NR dataset.) | 0 |
| multihaq | blastcut=X |
Restrict HAQESAC and MultiHAQ BLAST searches to top X BLAST hits | 0 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.