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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: fragcov
Option Type: LIST
| Module | Option | Description | Default |
|---|---|---|---|
| pagsat | fragcov=LIST |
List of coverage thresholds to count min. local BLAST hits (checks integrity) | 50,90,95,99 |
| pagsat_V1 | fragcov=LIST |
List of coverage thresholds to count min. local BLAST hits (checks integrity) | 50,90,95,99 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.