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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: maxseq
Option Type: X
Modules: orcfinder rje_mirna qslimfinder_V1.9 slimfinder_V4.9 slimprob_V1.4 rje_slimcore qslimfinder slimbench slimfinder slimprob slimsearch
| Module | Option | Description | Default |
|---|---|---|---|
| orcfinder | maxseq=X |
Maximum number of sequences to process | 500 |
| qslimfinder | maxseq=X |
Maximum number of sequences to process | 500 |
| qslimfinder_V1.9 | maxseq=X |
Maximum number of sequences to process | 500 |
| rje_mirna | maxseq=X |
Maximum number of sequences to process | 500 |
| rje_slimcore | maxseq=X |
Maximum number of sequences to process | 0 |
| slimbench | maxseq=X |
Maximum number of randsource sequences for SLiM to hit (also maxaa and maxupc limits) | 1000 |
| slimfinder | maxseq=X |
Maximum number of sequences to process | 500 |
| slimfinder_V4.9 | maxseq=X |
Maximum number of sequences to process | 500 |
| slimprob | maxseq=X |
Maximum number of sequences to process | 0 |
| slimprob_V1.4 | maxseq=X |
Maximum number of sequences to process | 0 |
| slimsearch | maxseq=X |
Maximum number of sequences to process | 0 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.