SLiMSuite REST Server


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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: minic

Option Type: X

Modules: qslimfinder_V1.9 slimbench_V1 slimfinder_V4.9 rje_motiflist rje_slimlist comparimotif_V3 presto_V5 qslimfinder slimbench slimfinder


ModuleOptionDescriptionDefault
comparimotif_V3 minic=X Min information content for a motif (1 fixed position = 1.0) 2.0
presto_V5 minic=X Min information content for a motif (1 fixed position = 1.0) 2.0
qslimfinder minic=X Minimum information content for returned motifs 2.1
qslimfinder_V1.9 minic=X Minimum information content for returned motifs 2.1
rje_motiflist minic=X Min information content for a motif (1 fixed position = 1.0) 2.0
rje_slimlist minic=X Min information content for a motif (1 fixed position = 1.0) 0.0
slimbench minic=X Min information content for a motif (1 fixed position = 1.0) 2.0; 1.1 for OccBench
slimbench_V1 minic=X Min information content for a motif (1 fixed position = 1.0) 2.0
slimfinder minic=X Minimum information content for returned motifs 2.1
slimfinder_V4.9 minic=X Minimum information content for returned motifs 2.1

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.