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SLiMSuite REST Server |
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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions.
Click on module names to check current documentation.
cmd: minocc
Option Type: X
Modules: rje_slimfungo slimgoer qslimfinder_V1.9 slimfinder_V4.9 qslimfinder slimfinder
Module | Option | Description | Default |
qslimfinder |
minocc=X |
Minimum number of unrelated occurrences for returned SLiMs. (Proportion of UP if < 1) |
0.05 |
qslimfinder_V1.9 |
minocc=X |
Minimum number of unrelated occurrences for returned SLiMs. (Proportion of UP if < 1) |
0.05 |
rje_slimfungo |
minocc=X |
Min occurrences for a motif in a GO category |
6 |
slimfinder |
minocc=X |
Minimum number of unrelated occurrences for returned SLiMs. (Proportion of UP if < 1) |
0.05 |
slimfinder_V4.9 |
minocc=X |
Minimum number of unrelated occurrences for returned SLiMs. (Proportion of UP if < 1) |
0.05 |
slimgoer |
minocc=X |
Minimum number of occurrences for a given Motif/GO combo |
5 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.
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