SLiMSuite REST Server


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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: peptides

Option Type: [?]{docs:?} FILE LIST T/F

Modules: prodigis rje_seqgen slim_pickings rje_slimlist peptcluster presto_V5 slimmaker


ModuleOptionDescriptionDefault
peptcluster peptides=LIST These can be entered as a list or file. Lines following '#' or '>' ignored peptides.txt
presto_V5 peptides=T/F Peptide design mode, using winsize=X to set size of peptides around motif False
prodigis peptides=FILE File containing list of identified peptides None
rje_seqgen peptides=LIST Alternative peptide sequence input for scrambling
rje_slimlist peptides=T/F Whether to output peptide sequences based on motif and winsize False
slim_pickings peptides=T/F Peptide design around discovered motifs False
slimmaker [peptides=?]{docs:?} ?

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.