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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: pickup

Option Type: T/F X

Modules: orcfinder qslimfinder_V1.9 slimfinder_V4.9 rje_iridis fiesta qslimfinder slimfarmer slimfinder

ModuleOptionDescriptionDefault
fiesta pickup=T/F Whether to read in partial results and skip those sequences True
orcfinder pickup=T/F Pick-up from aborted batch run by identifying last dataset output in resfile False
qslimfinder pickup=T/F Pick-up from aborted batch run by identifying datasets in resfile using RunID False
qslimfinder_V1.9 pickup=T/F Pick-up from aborted batch run by identifying datasets in resfile using RunID False
rje_iridis pickup=X Header to extract from OutList file and used to populate AccNum to skip
slimfarmer pickup=T/F Whether to pickup previous run based on existing results and RunID True
slimfinder pickup=T/F Pick-up from aborted batch run by identifying datasets in resfile False
slimfinder_V4.9 pickup=T/F Pick-up from aborted batch run by identifying datasets in resfile False
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.