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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: runid
Option Type: [?]{docs:?} LIST X
Modules: bob orcfinder slimdip qslimfinder_V1.9 slimbench_V1 slimfinder_V4.9 slimprob_V1.4 rje_iridis rje_slimcore presto_V5 qslimfinder slimbench slimfarmer slimfinder slimmutant slimprob slimsearch
| Module | Option | Description | Default |
|---|---|---|---|
| bob | runid=LIST |
List of RunIDs to include in output (all if none) | |
| orcfinder | [runid=?]{docs:?} |
? |
|
| presto_V5 | runid=X |
Adds an additional Run_ID column identifying the run (for multiple appended runs | None |
| qslimfinder | runid=X |
Run ID for resfile (allows multiple runs on same data) | DATE:TIME |
| qslimfinder_V1.9 | runid=X |
Run ID for resfile (allows multiple runs on same data) | DATE:TIME |
| rje_iridis | runid=X |
Text identifier for iX run | None |
| rje_slimcore | [runid=?]{docs:?} |
? |
|
| slimbench | runid=LIST |
List of factors to split RunID column into (on '.') | Program,Analysis |
| slimbench_V1 | runid=LIST |
List of factors to split RunID column into (on '.') | 'Program','Analysis' |
| slimdip | runid=X |
RunID for SLiMProb run. (Can also extract from SLiMProb occ.csv file | SLiMDIP |
| slimfarmer | runid=X |
Text identifier for SLiMSuite job farming | `job` |
| slimfinder | runid=X |
Run ID for resfile (allows multiple runs on same data) | DATE |
| slimfinder_V4.9 | runid=X |
Run ID for resfile (allows multiple runs on same data) | DATE |
| slimmutant | runid=X |
Limit analysis to SLiMProb RunID (blank = analyse all) | |
| slimprob | [runid=?]{docs:?} |
? |
|
| slimprob_V1.4 | [runid=?]{docs:?} |
? |
|
| slimsearch | [runid=?]{docs:?} |
? |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.