|
SLiMSuite REST Server |
| Links |
|---|
| REST Home |
| EdwardsLab Homepage |
| EdwardsLab Blog |
| SLiMSuite Blog |
| SLiMSuite |
| Webservers |
| Genomes |
| REST Pages |
| REST Status |
| REST Help |
| REST Tools |
| REST Alias Data |
| REST API |
| REST News |
| REST Sitemap |
SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: snapper
Option Type: T/F
| Module | Option | Description | Default |
|---|---|---|---|
| pagsat | snapper=T/F |
Run Snapper to generate "best" unique mapping of assembly contigs to Reference | True |
| pagsat_V1 | snapper=T/F |
Run Snapper on ctidX/haploid output following PAGSAT Tidy. (Re-Quiver recommended first.) | False |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.