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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: snptable

Option Type: FILE T/F

Modules: rje_samtools gablam


ModuleOptionDescriptionDefault
gablam snptable=T/F Generate a SNP table (similar to MUMmer NUCmer output) for query/hit overlap (fullblast=T) False
rje_samtools snptable=FILE Table of SNPs of cross-reference with FDR SNP output

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.