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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: startfrom
Option Type: [?]{docs:?} X
Modules: seqforker gopher_V2 rje_hpc rje_iridis gablam gopher presto_V5 seqmapper
| Module | Option | Description | Default |
|---|---|---|---|
| gablam | startfrom=X |
Accession number to start from | None |
| gopher | startfrom=X |
Accession Number / ID to start from. (Enables restart after crash.) | None |
| gopher_V2 | startfrom=X |
Accession Number / ID to start from. (Enables restart after crash.) | None |
| presto_V5 | startfrom=X |
Accession Number / ID to start from. (Enables restart after crash.) | None |
| rje_hpc | startfrom=X |
Sequence ID at which to begin the SeqBySeq farming | None |
| rje_iridis | [startfrom=?]{docs:?} |
? |
|
| seqforker | startfrom=X |
Will pick up program at this sequence, where X is the name or accession number | None |
| seqmapper | startfrom=X |
Shortname or AccNum of seqin file to startfrom (will append results) (memsaver=T only) | None |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.