SLiMSuite REST Server


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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: walltime

Option Type: X

Modules: orcfinder qslimfinder_V1.9 slimfinder_V4.9 slimprob_V1.4 rje_ppi rje_qsub rje_slimcore qslimfinder slimfarmer slimfinder slimprob slimsearch

The walltime command is used to kill programs that are taking too long. For SLiMSuite, it will interrupt running of the program on the commandline. (The exception is for PPI layouts, for which just the layout will be interrupted.) For QSub jobs started with SLiMFarmer (or rje_qsub), it simply sets the walltime for the qsub job.


ModuleOptionDescriptionDefault
orcfinder walltime=X Time in hours before program will abort search and exit 1.0
qslimfinder walltime=X Time in hours before program will abort search and exit 1.0
qslimfinder_V1.9 walltime=X Time in hours before program will abort search and exit 1.0
rje_ppi walltime=X Walltime (hours) for layouts 0.02
rje_qsub walltime=X Walltime for qsub job (hours) 60
rje_slimcore walltime=X Time in hours before program will abort search and exit 1.0
slimfarmer walltime=X Walltime for qsub job (hours) 12
slimfinder walltime=X Time in hours before program will abort search and exit 1.0
slimfinder_V4.9 walltime=X Time in hours before program will abort search and exit 1.0
slimprob walltime=X Time in hours before program will abort search and exit 1.0
slimprob_V1.4 walltime=X Time in hours before program will abort search and exit 1.0
slimsearch walltime=X Time in hours before program will abort search and exit 1.0

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.