|
SLiMSuite REST Server |
| Links |
|---|
| REST Home |
| EdwardsLab Homepage |
| EdwardsLab Blog |
| SLiMSuite Blog |
| SLiMSuite |
| Webservers |
| Genomes |
| REST Pages |
| REST Status |
| REST Help |
| REST Tools |
| REST Alias Data |
| REST API |
| REST News |
| REST Sitemap |
Option Type: SEQFILE
Argument: candidates negatives seqin
Modules: prothunter slimfinder slimprob
Sequence input files. Could be a FASFILE or Uniprot DATFILE.
| Module | Option | Description | Default |
|---|---|---|---|
| prothunter | candidates=SEQFILE |
File containing candidate protein sequences to go hunting for | |
| slimfinder | negatives=SEQFILE |
Multiply raw probabilities by under-representation in FILE (!!!Experimental!!!) | None |
| slimfinder | seqin=SEQFILE |
Sequence file to search. Over-rules batch=FILE and uniprotid=LIST | None |
| slimprob | seqin=SEQFILE |
Sequence file to search. Over-rules batch=FILE and uniprotid=LIST | None |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.