Gapped Ancestral Sequence Prediction
Copyright © 2005 Richard J. Edwards - See source code for GNU License Notice
This module is purely for running the GASP algorithm as a standalone program. All the main functionality is encoded in the modules listed below. The GASP algorithm itself is now encoded in the rje_ancseq module. GASP may also be run interactively from the rje_tree module.
help : Triggers Help = list of commandline arguments.
History Module Version History
# 0.0 - Initial Compilation. # 1.0 - Improved version with second pass. # 1.1 - Improved OO. Restriction to descendant AAs. (Good for BAD etc.) # 1.2 - No Out Object in Objects # 1.3 - Added more interactive load options # 1.4 - Minor tweaks to imports.
GASP REST Output formatsRun with
which is formatted as follows:
###~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~### # OUTFMT: ... contents for OUTFMT section ...
Available REST Outputs
© 2015 RJ Edwards. Contact: email@example.com.