Module: rje_codons Description: RJE Codon Usage module Version: 0.1 Last Edit: 16/08/11

Copyright © 2011 Richard J. Edwards - See source code for GNU License Notice

Imported modules: rje rje_db rje_seq rje_sequence rje_obj rje_zen

See SLiMSuite Blog for further documentation. See rje for general commands.

Function

Codon Usage Bias module

Commandline

seqin=FILE : Sequence file for Codon Usage analysis

See also rje.py generic commandline options.

History Module Version History

    # 0.0 - Initial Compilation.
    # 0.1 - Added Entropy-based calculation of CU Bias