Module: rje_lrbridge Description: Long read bridging methods library Version: 0.0 Last Edit: 19/04/21

Copyright © 2021 Richard J. Edwards - See source code for GNU License Notice

Imported modules: rje

See SLiMSuite Blog for further documentation. See rje for general commands.

Function

This module contains methods, modified from Diploidocus, to underpin GapSpanner, LocusFixer and SynBad reassembly of genome assembly regions. In each case, an RJE Object will need to be given to the method as self. This will enable easy incorporation of existing methods, with a quick update from self.method() calls to rje_lrbridge.method(self) calls.

Commandline

This module is not for standalone running and has no commandline options (including 'help'). All options are handled
by the parent modules.

History Module Version History

    # 0.0 - Initial Compilation.