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SLiMSuite CompariMotif Server
# Output for CompariMotif V3.13.0: Wed Dec 9 00:31:45 2015 # 0 warnings; 0 errors. # JobID: 15120900004
Your CompariMotif job has finished running and outputs have been parsed. Click on tabs to see server output. (Mouseover for description.)
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Click here for CompariMotif help/documentation.
Content for individual tabs can be returned using &rest=X, where X is the tab name (e.g. &rest=log). Full output can be returned as text using &rest=full and parsed using SLiMParser:
python PATH/slimparser.py restin=JOBID restout=T [password=X] [restbase=X]
JobID 15120900004 (comparimotif) Finished. IP:129.94.133.155 No queue. comparimotif&motifs=jobid:15120800001:main&searchdb=LIG_PCNA_PIPBox_1 Run Started: 2015-12-09 00:31:45; PID=39344 Run finished: 2015-12-09 00:31:46
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for more user-friendly formatted output. Individual outputs can be identified/parsed using
&rest=help for general options. Run with &rest=full to get full server output as text or &rest=formatfor more user-friendly formatted output. Individual outputs can be identified/parsed using
&rest=OUTFMT.Click here and save the page to download this output.
Dataset,RunID,Masking,Build,Chance,RunTime,SeqNum,UPNum,AANum,MotNum,Rank,Sig,Pattern,IC,Occ,Support,UP,ExpUP,Prob,Cloud,CloudSeq,CloudUP
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,1,3.42e-12,Q..[IL].SFF,4.77,7,7,6,0.002,1.32e-20,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,2,2.87e-11,Q.[ST]..SFF,4.77,7,7,6,0.003,1.11e-19,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,3,6.06e-11,Q.[ST][IL]..FF,4.54,10,10,6,0.004,2.34e-19,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,4,2.64e-10,Q.TL..FF,5.00,5,5,5,9.01e-04,1.02e-18,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,5,8.15e-09,Q..L..FF,4.00,8,8,6,0.016,1.89e-15,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,6,1.11e-08,[ST][IL].SFF,4.54,7,6,6,0.009,4.27e-17,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,7,1.85e-08,TL.SFF,5.00,5,5,5,0.002,7.13e-17,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,8,3.76e-08,Q.[ST][IL].S.F,4.54,6,6,6,0.011,1.45e-16,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,9,4.40e-08,Q.[ST][IL].SF,4.54,6,6,6,0.011,1.70e-16,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,10,9.98e-08,Q..[IL]..FF,3.77,14,14,6,0.025,2.31e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,11,1.55e-06,Q..I..FF..K,5.00,4,4,4,7.69e-04,5.97e-15,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,12,9.24e-06,Q.T..SFF,5.00,4,4,4,0.001,3.56e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,13,1.66e-05,[IL].SFF,3.77,9,8,6,0.058,3.83e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,14,1.88e-05,"TL.{0,1}S.{0,1}FF",5.00,5,5,5,0.008,7.27e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,15,2.05e-05,Q..L.SFF,5.00,5,5,4,0.001,7.90e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,16,2.56e-05,"Q..I..FF.{1,2}K",5.00,5,5,4,0.002,9.88e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,17,4.39e-05,TL..FF,4.00,6,6,5,0.023,1.02e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,18,5.50e-05,Q..[IL].S.F,3.77,8,8,6,0.070,1.27e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,19,6.39e-05,Q..[IL].SF,3.77,7,7,6,0.072,1.48e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,20,1.07e-04,K..Q..[IL]..FF,4.77,4,4,4,0.002,4.14e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,21,1.40e-04,[ST]..SFF,3.77,8,7,6,0.082,3.23e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,22,1.53e-04,[KR]Q..L..FF,4.77,5,5,4,0.002,5.92e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,23,1.64e-04,Q.TL..F,4.00,5,5,5,0.030,3.81e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,24,2.11e-04,Q.TL.S.F,5.00,4,4,4,0.003,8.13e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,25,2.13e-04,T..SFF,4.00,5,5,5,0.031,4.92e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,26,2.33e-04,Q.TL.SF,5.00,4,4,4,0.003,9.00e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,27,2.53e-04,[ST][IL]..FF,3.54,11,10,6,0.091,5.85e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,28,3.68e-04,Q..I..FF,4.00,6,6,4,0.008,8.53e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,29,4.49e-04,Q.[ST]..S.F,3.77,8,8,6,0.100,1.04e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,30,5.03e-04,[KR]..TL..FF,4.77,4,4,4,0.003,1.94e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,31,5.25e-04,Q.[ST]..SF,3.77,7,7,6,0.10,1.22e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,32,5.55e-04,L.SFF,4.00,6,6,5,0.038,1.29e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,33,5.99e-04,Q.T..S.F,4.00,5,5,5,0.038,1.39e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,34,7.21e-04,"I..FF.{1,2}K",4.00,6,6,5,0.040,1.67e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,35,0.001,Q.[ST][IL]..F,3.54,10,10,6,0.12,2.57e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,36,0.002,[KR]Q.TL..F,4.77,4,4,4,0.004,6.89e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,37,0.002,"Q.T.{1,2}S.{0,1}FF",5.00,5,5,4,0.005,8.94e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,38,0.004,[ILM]..F[FY],2.40,20,17,8,0.98,5.27e-08,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,39,0.006,[IL]..FF,2.77,17,16,7,0.59,8.47e-08,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,40,0.010,TL.S.F,4.00,5,5,5,0.067,2.24e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,41,0.011,TL.SF,4.00,5,5,5,0.069,2.57e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,42,0.011,I..FF..K,4.00,4,4,4,0.020,2.57e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,43,0.013,Q.SI..FF,5.00,3,3,3,7.66e-04,4.91e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,44,0.019,"Q.T.{1,2}S.F",4.00,6,6,5,0.077,4.48e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,45,0.020,"Q.T..S.{0,1}F",4.00,5,5,5,0.077,4.58e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,46,0.026,L..FF,3.00,9,9,6,0.39,3.61e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,47,0.037,[ILMV]..F[FY],2.31,22,18,8,1.31,5.20e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,48,0.048,I..FF,3.00,8,8,5,0.21,6.84e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,49,0.093,KQ..L..FF,5.00,3,3,3,0.002,3.75e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,50,0.098,Q..L..F,3.00,8,8,6,0.50,1.43e-06,1,18,8
Click here and save the page to download this output.
LIG_PCNA_PIPBox_1 ((^.{0,3})|(Q)).[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. # The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances]
Click here and save the page to download this output.
| MotifFile | SearchDB | Name1 | Name2 | Motif1 | Motif2 | Sim1 | Sim2 | Match | MatchPos | MatchIC | NormIC | CoreIC | Score | Info1 | Info2 | Desc1 | Desc2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#1#Q..[IL].SFF | LIG_PCNA_PIPBox_1_a | Q..[IL].SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 3.070 | 0.971 | 0.632 | 4.855 | 4.77 | 3.16 | slimfinder#15120800001#1#Q..[IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#1#Q..[IL].SFF | LIG_PCNA_PIPBox_1_b | Q..[IL].SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.426 | 2.619 | 4.77 | 3.16 | slimfinder#15120800001#1#Q..[IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#10#Q..[IL]..FF | LIG_PCNA_PIPBox_1_a | Q..[IL]..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.719 | 3.668 | 3.77 | 3.16 | slimfinder#15120800001#10#Q..[IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#10#Q..[IL]..FF | LIG_PCNA_PIPBox_1_b | Q..[IL]..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.601 | 0.471 | 1.803 | 3.77 | 3.16 | slimfinder#15120800001#10#Q..[IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#11#Q..I..FF..K | LIG_PCNA_PIPBox_1_a | Q..I..FF..K | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Parent | Complex Subsequence | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].. | 4 | 2.900 | 0.917 | 0.680 | 3.668 | 5.00 | 3.16 | slimfinder#15120800001#11#Q..I..FF..K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#11#Q..I..FF..K | LIG_PCNA_PIPBox_1_b | Q..I..FF..K | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].. | 3 | 1.900 | 0.601 | 0.446 | 1.803 | 5.00 | 3.16 | slimfinder#15120800001#11#Q..I..FF..K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#12#Q.T..SFF | LIG_PCNA_PIPBox_1_a | Q.T..SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.512 | 0.794 | 0.444 | 3.972 | 5.00 | 3.16 | slimfinder#15120800001#12#Q.T..SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#13#[IL].SFF | LIG_PCNA_PIPBox_1_a | [IL].SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.547 | 2.619 | 3.77 | 3.16 | slimfinder#15120800001#13#[IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#13#[IL].SFF | LIG_PCNA_PIPBox_1_b | [IL].SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.547 | 2.619 | 3.77 | 3.16 | slimfinder#15120800001#13#[IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF | LIG_PCNA_PIPBox_1_a | TL.{0,1}S.{0,1}FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.428 | 3.392 | 5.00 | 3.16 | slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF | LIG_PCNA_PIPBox_1_b | TL.{0,1}S.{0,1}FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.428 | 3.392 | 5.00 | 3.16 | slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#15#Q..L.SFF | LIG_PCNA_PIPBox_1_a | Q..L.SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 3.070 | 0.971 | 0.603 | 4.855 | 5.00 | 3.16 | slimfinder#15120800001#15#Q..L.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#15#Q..L.SFF | LIG_PCNA_PIPBox_1_b | Q..L.SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.407 | 2.619 | 5.00 | 3.16 | slimfinder#15120800001#15#Q..L.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#16#Q..I..FF.{1#2}K | LIG_PCNA_PIPBox_1_a | Q..I..FF.{1,2}K | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Match | Complex Match | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].k | 4 | 2.900 | 0.917 | 0.551 | 3.668 | 5.00 | 3.16 | slimfinder#15120800001#16#Q..I..FF.{1#2}K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#16#Q..I..FF.{1#2}K | LIG_PCNA_PIPBox_1_b | Q..I..FF.{1,2}K | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].k | 3 | 1.900 | 0.601 | 0.361 | 1.803 | 5.00 | 3.16 | slimfinder#15120800001#16#Q..I..FF.{1#2}K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#17#TL..FF | LIG_PCNA_PIPBox_1_a | TL..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.471 | 2.498 | 4.00 | 3.16 | slimfinder#15120800001#17#TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#17#TL..FF | LIG_PCNA_PIPBox_1_b | TL..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.471 | 2.498 | 4.00 | 3.16 | slimfinder#15120800001#17#TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#18#Q..[IL].S.F | LIG_PCNA_PIPBox_1_a | Q..[IL].S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.437 | 0.771 | 0.542 | 3.083 | 3.77 | 3.16 | slimfinder#15120800001#18#Q..[IL].S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#19#Q..[IL].SF | LIG_PCNA_PIPBox_1_a | Q..[IL].SF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 2.437 | 0.771 | 0.631 | 3.083 | 3.77 | 3.16 | slimfinder#15120800001#19#Q..[IL].SF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#2#Q.[ST]..SFF | LIG_PCNA_PIPBox_1_a | Q.[ST]..SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.512 | 0.794 | 0.463 | 3.972 | 4.77 | 3.16 | slimfinder#15120800001#2#Q.[ST]..SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#20#K..Q..[IL]..FF | LIG_PCNA_PIPBox_1_a | K..Q..[IL]..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.719 | 3.668 | 4.77 | 3.16 | slimfinder#15120800001#20#K..Q..[IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#22#[KR]Q..L..FF | LIG_PCNA_PIPBox_1_a | [KR]Q..L..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.680 | 3.668 | 4.77 | 3.16 | slimfinder#15120800001#22#[KR]Q..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#22#[KR]Q..L..FF | LIG_PCNA_PIPBox_1_b | [KR]Q..L..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [kr]q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.601 | 0.378 | 1.803 | 4.77 | 3.16 | slimfinder#15120800001#22#[KR]Q..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#23#Q.TL..F | LIG_PCNA_PIPBox_1_a | Q.TL..F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 2.341 | 0.740 | 0.559 | 2.962 | 4.00 | 3.16 | slimfinder#15120800001#23#Q.TL..F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#24#Q.TL.S.F | LIG_PCNA_PIPBox_1_a | Q.TL.S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.512 | 0.794 | 0.444 | 3.972 | 5.00 | 3.16 | slimfinder#15120800001#24#Q.TL.S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#26#Q.TL.SF | LIG_PCNA_PIPBox_1_a | Q.TL.SF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 5 | 2.512 | 0.794 | 0.501 | 3.972 | 5.00 | 3.16 | slimfinder#15120800001#26#Q.TL.SF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#27#[ST][IL]..FF | LIG_PCNA_PIPBox_1_a | [ST][IL]..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.530 | 2.498 | 3.54 | 3.16 | slimfinder#15120800001#27#[ST][IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#27#[ST][IL]..FF | LIG_PCNA_PIPBox_1_b | [ST][IL]..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.530 | 2.498 | 3.54 | 3.16 | slimfinder#15120800001#27#[ST][IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#28#Q..I..FF | LIG_PCNA_PIPBox_1_a | Q..I..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.680 | 3.668 | 4.00 | 3.16 | slimfinder#15120800001#28#Q..I..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#28#Q..I..FF | LIG_PCNA_PIPBox_1_b | Q..I..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.601 | 0.446 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#28#Q..I..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#29#Q.[ST]..S.F | LIG_PCNA_PIPBox_1_a | Q.[ST]..S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.878 | 0.594 | 0.372 | 2.376 | 3.77 | 3.16 | slimfinder#15120800001#29#Q.[ST]..S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#3#Q.[ST][IL]..FF | LIG_PCNA_PIPBox_1_a | Q.[ST][IL]..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.974 | 0.941 | 0.629 | 4.703 | 4.54 | 3.16 | slimfinder#15120800001#3#Q.[ST][IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#3#Q.[ST][IL]..FF | LIG_PCNA_PIPBox_1_b | Q.[ST][IL]..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.418 | 2.498 | 4.54 | 3.16 | slimfinder#15120800001#3#Q.[ST][IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#30#[KR]..TL..FF | LIG_PCNA_PIPBox_1_a | [KR]..TL..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.381 | 2.498 | 4.77 | 3.16 | slimfinder#15120800001#30#[KR]..TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#30#[KR]..TL..FF | LIG_PCNA_PIPBox_1_b | [KR]..TL..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [kr]..[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.398 | 2.498 | 4.77 | 3.16 | slimfinder#15120800001#30#[KR]..TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#31#Q.[ST]..SF | LIG_PCNA_PIPBox_1_a | Q.[ST]..SF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 1.878 | 0.594 | 0.425 | 2.376 | 3.77 | 3.16 | slimfinder#15120800001#31#Q.[ST]..SF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#32#L.SFF | LIG_PCNA_PIPBox_1_a | L.SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.515 | 2.619 | 4.00 | 3.16 | slimfinder#15120800001#32#L.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#32#L.SFF | LIG_PCNA_PIPBox_1_b | L.SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.070 | 0.655 | 0.515 | 2.619 | 4.00 | 3.16 | slimfinder#15120800001#32#L.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#33#Q.T..S.F | LIG_PCNA_PIPBox_1_a | Q.T..S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.878 | 0.594 | 0.355 | 2.376 | 4.00 | 3.16 | slimfinder#15120800001#33#Q.T..S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#34#I..FF.{1#2}K | LIG_PCNA_PIPBox_1_a | I..FF.{1,2}K | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy].k | 3 | 1.900 | 0.601 | 0.454 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#34#I..FF.{1#2}K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#34#I..FF.{1#2}K | LIG_PCNA_PIPBox_1_b | I..FF.{1,2}K | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy].k | 3 | 1.900 | 0.601 | 0.454 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#34#I..FF.{1#2}K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#35#Q.[ST][IL]..F | LIG_PCNA_PIPBox_1_a | Q.[ST][IL]..F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 2.341 | 0.740 | 0.628 | 2.962 | 3.54 | 3.16 | slimfinder#15120800001#35#Q.[ST][IL]..F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#36#[KR]Q.TL..F | LIG_PCNA_PIPBox_1_a | [KR]Q.TL..F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 2.341 | 0.740 | 0.559 | 2.962 | 4.77 | 3.16 | slimfinder#15120800001#36#[KR]Q.TL..F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#37#Q.T.{1#2}S.{0#1}FF | LIG_PCNA_PIPBox_1_a | Q.T.{1,2}S.{0,1}FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.512 | 0.794 | 0.444 | 3.972 | 5.00 | 3.16 | slimfinder#15120800001#37#Q.T.{1#2}S.{0#1}FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#38#[ILM]..F[FY] | LIG_PCNA_PIPBox_1_a | [ILM]..F[FY] | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ILM][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.791 | 0.734 | 2.373 | 2.40 | 3.16 | slimfinder#15120800001#38#[ILM]..F[FY] | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#38#[ILM]..F[FY] | LIG_PCNA_PIPBox_1_b | [ILM]..F[FY] | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ILM][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.791 | 0.734 | 2.373 | 2.40 | 3.16 | slimfinder#15120800001#38#[ILM]..F[FY] | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#39#[IL]..FF | LIG_PCNA_PIPBox_1_a | [IL]..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.686 | 0.643 | 2.059 | 2.77 | 3.16 | slimfinder#15120800001#39#[IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#39#[IL]..FF | LIG_PCNA_PIPBox_1_b | [IL]..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.686 | 0.643 | 2.059 | 2.77 | 3.16 | slimfinder#15120800001#39#[IL]..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#4#Q.TL..FF | LIG_PCNA_PIPBox_1_a | Q.TL..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.974 | 0.941 | 0.573 | 4.703 | 5.00 | 3.16 | slimfinder#15120800001#4#Q.TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#4#Q.TL..FF | LIG_PCNA_PIPBox_1_b | Q.TL..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.381 | 2.498 | 5.00 | 3.16 | slimfinder#15120800001#4#Q.TL..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#42#I..FF..K | LIG_PCNA_PIPBox_1_a | I..FF..K | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | [ilm][^p][acdegkmnqrst][fhm][fmy].. | 3 | 1.900 | 0.601 | 0.596 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#42#I..FF..K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#42#I..FF..K | LIG_PCNA_PIPBox_1_b | I..FF..K | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | [ilm][^p][acdegkmnqrst][fhm][fmy].. | 3 | 1.900 | 0.601 | 0.596 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#42#I..FF..K | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#43#Q.SI..FF | LIG_PCNA_PIPBox_1_a | Q.SI..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.974 | 0.941 | 0.573 | 4.703 | 5.00 | 3.16 | slimfinder#15120800001#43#Q.SI..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#43#Q.SI..FF | LIG_PCNA_PIPBox_1_b | Q.SI..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.974 | 0.624 | 0.381 | 2.498 | 5.00 | 3.16 | slimfinder#15120800001#43#Q.SI..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#44#Q.T.{1#2}S.F | LIG_PCNA_PIPBox_1_a | Q.T.{1,2}S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 1.878 | 0.594 | 0.355 | 2.376 | 4.00 | 3.16 | slimfinder#15120800001#44#Q.T.{1#2}S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#45#Q.T..S.{0#1}F | LIG_PCNA_PIPBox_1_a | Q.T..S.{0,1}F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 4 | 1.878 | 0.594 | 0.404 | 2.376 | 4.00 | 3.16 | slimfinder#15120800001#45#Q.T..S.{0#1}F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#46#L..FF | LIG_PCNA_PIPBox_1_a | L..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.633 | 0.596 | 1.900 | 3.00 | 3.16 | slimfinder#15120800001#46#L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#46#L..FF | LIG_PCNA_PIPBox_1_b | L..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.633 | 0.596 | 1.900 | 3.00 | 3.16 | slimfinder#15120800001#46#L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#47#[ILMV]..F[FY] | LIG_PCNA_PIPBox_1_a | [ILMV]..F[FY] | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilmv][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.804 | 0.782 | 0.697 | 2.347 | 2.31 | 3.16 | slimfinder#15120800001#47#[ILMV]..F[FY] | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#47#[ILMV]..F[FY] | LIG_PCNA_PIPBox_1_b | [ILMV]..F[FY] | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilmv][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.804 | 0.782 | 0.697 | 2.347 | 2.31 | 3.16 | slimfinder#15120800001#47#[ILMV]..F[FY] | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#48#I..FF | LIG_PCNA_PIPBox_1_a | I..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.633 | 0.596 | 1.900 | 3.00 | 3.16 | slimfinder#15120800001#48#I..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#48#I..FF | LIG_PCNA_PIPBox_1_b | I..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.633 | 0.596 | 1.900 | 3.00 | 3.16 | slimfinder#15120800001#48#I..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#49#KQ..L..FF | LIG_PCNA_PIPBox_1_a | KQ..L..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Overlap | Complex Overlap | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.680 | 3.668 | 5.00 | 3.16 | slimfinder#15120800001#49#KQ..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#49#KQ..L..FF | LIG_PCNA_PIPBox_1_b | KQ..L..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | kq.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.601 | 0.361 | 1.803 | 5.00 | 3.16 | slimfinder#15120800001#49#KQ..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#5#Q..L..FF | LIG_PCNA_PIPBox_1_a | Q..L..FF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 4 | 2.900 | 0.917 | 0.680 | 3.668 | 4.00 | 3.16 | slimfinder#15120800001#5#Q..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#5#Q..L..FF | LIG_PCNA_PIPBox_1_b | Q..L..FF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 3 | 1.900 | 0.601 | 0.446 | 1.803 | 4.00 | 3.16 | slimfinder#15120800001#5#Q..L..FF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#50#Q..L..F | LIG_PCNA_PIPBox_1_a | Q..L..F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 3 | 2.267 | 0.756 | 0.695 | 2.267 | 3.00 | 3.16 | slimfinder#15120800001#50#Q..L..F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#6#[ST][IL].SFF | LIG_PCNA_PIPBox_1_a | [ST][IL].SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.471 | 3.392 | 4.54 | 3.16 | slimfinder#15120800001#6#[ST][IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#6#[ST][IL].SFF | LIG_PCNA_PIPBox_1_b | [ST][IL].SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.471 | 3.392 | 4.54 | 3.16 | slimfinder#15120800001#6#[ST][IL].SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#7#TL.SFF | LIG_PCNA_PIPBox_1_a | TL.SFF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.428 | 3.392 | 5.00 | 3.16 | slimfinder#15120800001#7#TL.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#7#TL.SFF | LIG_PCNA_PIPBox_1_b | TL.SFF | ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.145 | 0.678 | 0.428 | 3.392 | 5.00 | 3.16 | slimfinder#15120800001#7#TL.SFF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#8#Q.[ST][IL].S.F | LIG_PCNA_PIPBox_1_a | Q.[ST][IL].S.F | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] | 5 | 2.512 | 0.794 | 0.484 | 3.972 | 4.54 | 3.16 | slimfinder#15120800001#8#Q.[ST][IL].S.F | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
| comparimotif | LIG_PCNA_PIPBox_1 | slimfinder#15120800001#9#Q.[ST][IL].SF | LIG_PCNA_PIPBox_1_a | Q.[ST][IL].SF | Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. | Complex Subsequence | Complex Parent | Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] | 5 | 2.512 | 0.794 | 0.551 | 3.972 | 4.54 | 3.16 | slimfinder#15120800001#9#Q.[ST][IL].SF | The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2 |
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| #~~# | #~+~~+~# | #~~# |
| #LOG | 00:00:00 | Activity Log for SLiMSuite V1.5.2: Wed Dec 9 00:31:45 2015 |
| #DIR | 00:00:00 | Run from directory: /srv/slimsuite/logs/prod |
| #ARG | 00:00:00 | Commandline arguments: run ip=129.94.133.155 comparimotif&motifs=jobid:15120800001:main&searchdb=LIG_PCNA_PIPBox_1&jobid=15120900004 |
| #VIO | 00:00:00 | Verbosity: -1; Interactivity: -1. |
| #PROG | 00:00:00 | CompariMotif V3.13.0: Motif vs Motif Comparison |
| #CMD | 00:00:00 | Full CompariMotif CmdList: proglog=F iucut=0.2 usegopher=T protscores=T megablam=F orthdb=qfo_ref.2015-04.Eukaryota.fas sourcedate=2015-04-15 walltime=0 maxgapx=3 motific=T ambcut=0 backups=F rest=format motifs=comparimotif.motifs searchdb=LIG_PCNA_PIPBox_1.motif jobid=15120900004 basefile=comparimotif |
| #DB | 00:00:00 | /srv/slimsuite/data/orthdb/qfo_ref.2015-04/qfo_ref.2015-04.Eukaryota.fas already formatted. (Force = False). |
| #MOT | 00:00:00 | 50 motifs read from /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.motifs (51 lines): 50 retained. |
| #DB | 00:00:00 | /srv/slimsuite/data/orthdb/qfo_ref.2015-04/qfo_ref.2015-04.Eukaryota.fas already formatted. (Force = False). |
| #SPLIT | 00:00:00 | Found /srv/slimsuite/data/elm2015/ELM_Classes/LIG_PCNA_PIPBox_1.split.motifs. Will load instead. |
| #MOT | 00:00:00 | 2 motifs read from /srv/slimsuite/data/elm2015/ELM_Classes/LIG_PCNA_PIPBox_1.split.motifs (2 lines): 2 retained. |
| #COMP | 00:00:00 | Comparing MotifFile & SearchDB: 100 comparisons made. |
| #COMP | 00:00:00 | 73 motif matches output to /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.compare.tdt. Rank by "Score" column. |
| #COMP | 00:00:00 | 4 input motifs unmatched. |
| #XGMML | 00:00:00 | Output of XGMML file /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.compare.xgmml for Cytoscape complete. |
| #LOG | 00:00:00 | CompariMotif V3.13.0 End: Wed Dec 9 00:31:46 2015 |
| #JOBID | 00:00:00 | 15120900004 |
| #REST | 00:00:00 | URL for future retrieval: http://rest.slimsuite.unsw.edu.au/retrieve&jobid=15120900004&rest=format&password=None |
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© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.