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SLiMSuite CompariMotif Server

# Output for CompariMotif V3.13.0: Wed Dec  9 00:31:45 2015
# 0 warnings; 0 errors.
# JobID: 15120900004

Click here for CompariMotif help/documentation. Click on tabs to see server output. (Mouseover for description.)

Content for individual tabs can be returned using &rest=X, where X is the tab name (e.g. &rest=log). Full output can be returned as text using &rest=full and parsed using SLiMParser.

JobID 15120900004 (comparimotif) Finished.
IP:129.94.133.155
No queue.
comparimotif&motifs=jobid:15120800001:main&searchdb=LIG_PCNA_PIPBox_1
Run Started: 2015-12-09 00:31:45; PID=39344
Run finished: 2015-12-09 00:31:46


 Run with &rest=help for general options. Run with &rest=full to get full server output as text or &rest=format
for more user-friendly formatted output. Individual outputs can be identified/parsed using &rest=OUTFMT.
Dataset,RunID,Masking,Build,Chance,RunTime,SeqNum,UPNum,AANum,MotNum,Rank,Sig,Pattern,IC,Occ,Support,UP,ExpUP,Prob,Cloud,CloudSeq,CloudUP
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,1,3.42e-12,Q..[IL].SFF,4.77,7,7,6,0.002,1.32e-20,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,2,2.87e-11,Q.[ST]..SFF,4.77,7,7,6,0.003,1.11e-19,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,3,6.06e-11,Q.[ST][IL]..FF,4.54,10,10,6,0.004,2.34e-19,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,4,2.64e-10,Q.TL..FF,5.00,5,5,5,9.01e-04,1.02e-18,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,5,8.15e-09,Q..L..FF,4.00,8,8,6,0.016,1.89e-15,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,6,1.11e-08,[ST][IL].SFF,4.54,7,6,6,0.009,4.27e-17,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,7,1.85e-08,TL.SFF,5.00,5,5,5,0.002,7.13e-17,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,8,3.76e-08,Q.[ST][IL].S.F,4.54,6,6,6,0.011,1.45e-16,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,9,4.40e-08,Q.[ST][IL].SF,4.54,6,6,6,0.011,1.70e-16,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,10,9.98e-08,Q..[IL]..FF,3.77,14,14,6,0.025,2.31e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,11,1.55e-06,Q..I..FF..K,5.00,4,4,4,7.69e-04,5.97e-15,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,12,9.24e-06,Q.T..SFF,5.00,4,4,4,0.001,3.56e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,13,1.66e-05,[IL].SFF,3.77,9,8,6,0.058,3.83e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,14,1.88e-05,"TL.{0,1}S.{0,1}FF",5.00,5,5,5,0.008,7.27e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,15,2.05e-05,Q..L.SFF,5.00,5,5,4,0.001,7.90e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,16,2.56e-05,"Q..I..FF.{1,2}K",5.00,5,5,4,0.002,9.88e-14,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,17,4.39e-05,TL..FF,4.00,6,6,5,0.023,1.02e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,18,5.50e-05,Q..[IL].S.F,3.77,8,8,6,0.070,1.27e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,19,6.39e-05,Q..[IL].SF,3.77,7,7,6,0.072,1.48e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,20,1.07e-04,K..Q..[IL]..FF,4.77,4,4,4,0.002,4.14e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,21,1.40e-04,[ST]..SFF,3.77,8,7,6,0.082,3.23e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,22,1.53e-04,[KR]Q..L..FF,4.77,5,5,4,0.002,5.92e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,23,1.64e-04,Q.TL..F,4.00,5,5,5,0.030,3.81e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,24,2.11e-04,Q.TL.S.F,5.00,4,4,4,0.003,8.13e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,25,2.13e-04,T..SFF,4.00,5,5,5,0.031,4.92e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,26,2.33e-04,Q.TL.SF,5.00,4,4,4,0.003,9.00e-13,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,27,2.53e-04,[ST][IL]..FF,3.54,11,10,6,0.091,5.85e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,28,3.68e-04,Q..I..FF,4.00,6,6,4,0.008,8.53e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,29,4.49e-04,Q.[ST]..S.F,3.77,8,8,6,0.100,1.04e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,30,5.03e-04,[KR]..TL..FF,4.77,4,4,4,0.003,1.94e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,31,5.25e-04,Q.[ST]..SF,3.77,7,7,6,0.10,1.22e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,32,5.55e-04,L.SFF,4.00,6,6,5,0.038,1.29e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,33,5.99e-04,Q.T..S.F,4.00,5,5,5,0.038,1.39e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,34,7.21e-04,"I..FF.{1,2}K",4.00,6,6,5,0.040,1.67e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,35,0.001,Q.[ST][IL]..F,3.54,10,10,6,0.12,2.57e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,36,0.002,[KR]Q.TL..F,4.77,4,4,4,0.004,6.89e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,37,0.002,"Q.T.{1,2}S.{0,1}FF",5.00,5,5,4,0.005,8.94e-12,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,38,0.004,[ILM]..F[FY],2.40,20,17,8,0.98,5.27e-08,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,39,0.006,[IL]..FF,2.77,17,16,7,0.59,8.47e-08,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,40,0.010,TL.S.F,4.00,5,5,5,0.067,2.24e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,41,0.011,TL.SF,4.00,5,5,5,0.069,2.57e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,42,0.011,I..FF..K,4.00,4,4,4,0.020,2.57e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,43,0.013,Q.SI..FF,5.00,3,3,3,7.66e-04,4.91e-11,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,44,0.019,"Q.T.{1,2}S.F",4.00,6,6,5,0.077,4.48e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,45,0.020,"Q.T..S.{0,1}F",4.00,5,5,5,0.077,4.58e-09,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,46,0.026,L..FF,3.00,9,9,6,0.39,3.61e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,47,0.037,[ILMV]..F[FY],2.31,22,18,8,1.31,5.20e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,48,0.048,I..FF,3.00,8,8,5,0.21,6.84e-07,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,49,0.093,KQ..L..FF,5.00,3,3,3,0.002,3.75e-10,1,18,8
slimfinder,15120800001,FreqDisComp-5-8FT,l5w2o2a3,Sig,00:02:48,18,8,8004,50,50,0.098,Q..L..F,3.00,8,8,6,0.50,1.43e-06,1,18,8
LIG_PCNA_PIPBox_1  ((^.{0,3})|(Q)).[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY]..  # The PCNA binding PIP box  motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances]
MotifFile SearchDB Name1 Name2 Motif1 Motif2 Sim1 Sim2 Match MatchPos MatchIC NormIC CoreIC Score Info1 Info2 Desc1 Desc2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#1#Q..[IL].SFF LIG_PCNA_PIPBox_1_a Q..[IL].SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 3.070 0.971 0.632 4.855 4.77 3.16 slimfinder#15120800001#1#Q..[IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#1#Q..[IL].SFF LIG_PCNA_PIPBox_1_b Q..[IL].SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.426 2.619 4.77 3.16 slimfinder#15120800001#1#Q..[IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#10#Q..[IL]..FF LIG_PCNA_PIPBox_1_a Q..[IL]..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.719 3.668 3.77 3.16 slimfinder#15120800001#10#Q..[IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#10#Q..[IL]..FF LIG_PCNA_PIPBox_1_b Q..[IL]..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.601 0.471 1.803 3.77 3.16 slimfinder#15120800001#10#Q..[IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#11#Q..I..FF..K LIG_PCNA_PIPBox_1_a Q..I..FF..K Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Parent Complex Subsequence Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].. 4 2.900 0.917 0.680 3.668 5.00 3.16 slimfinder#15120800001#11#Q..I..FF..K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#11#Q..I..FF..K LIG_PCNA_PIPBox_1_b Q..I..FF..K ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].. 3 1.900 0.601 0.446 1.803 5.00 3.16 slimfinder#15120800001#11#Q..I..FF..K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#12#Q.T..SFF LIG_PCNA_PIPBox_1_a Q.T..SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.512 0.794 0.444 3.972 5.00 3.16 slimfinder#15120800001#12#Q.T..SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#13#[IL].SFF LIG_PCNA_PIPBox_1_a [IL].SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.547 2.619 3.77 3.16 slimfinder#15120800001#13#[IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#13#[IL].SFF LIG_PCNA_PIPBox_1_b [IL].SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.547 2.619 3.77 3.16 slimfinder#15120800001#13#[IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF LIG_PCNA_PIPBox_1_a TL.{0,1}S.{0,1}FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.428 3.392 5.00 3.16 slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF LIG_PCNA_PIPBox_1_b TL.{0,1}S.{0,1}FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.428 3.392 5.00 3.16 slimfinder#15120800001#14#TL.{0#1}S.{0#1}FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#15#Q..L.SFF LIG_PCNA_PIPBox_1_a Q..L.SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 3.070 0.971 0.603 4.855 5.00 3.16 slimfinder#15120800001#15#Q..L.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#15#Q..L.SFF LIG_PCNA_PIPBox_1_b Q..L.SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.407 2.619 5.00 3.16 slimfinder#15120800001#15#Q..L.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#16#Q..I..FF.{1#2}K LIG_PCNA_PIPBox_1_a Q..I..FF.{1,2}K Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Match Complex Match Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].k 4 2.900 0.917 0.551 3.668 5.00 3.16 slimfinder#15120800001#16#Q..I..FF.{1#2}K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#16#Q..I..FF.{1#2}K LIG_PCNA_PIPBox_1_b Q..I..FF.{1,2}K ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy].k 3 1.900 0.601 0.361 1.803 5.00 3.16 slimfinder#15120800001#16#Q..I..FF.{1#2}K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#17#TL..FF LIG_PCNA_PIPBox_1_a TL..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.471 2.498 4.00 3.16 slimfinder#15120800001#17#TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#17#TL..FF LIG_PCNA_PIPBox_1_b TL..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.471 2.498 4.00 3.16 slimfinder#15120800001#17#TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#18#Q..[IL].S.F LIG_PCNA_PIPBox_1_a Q..[IL].S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.437 0.771 0.542 3.083 3.77 3.16 slimfinder#15120800001#18#Q..[IL].S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#19#Q..[IL].SF LIG_PCNA_PIPBox_1_a Q..[IL].SF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 2.437 0.771 0.631 3.083 3.77 3.16 slimfinder#15120800001#19#Q..[IL].SF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#2#Q.[ST]..SFF LIG_PCNA_PIPBox_1_a Q.[ST]..SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.512 0.794 0.463 3.972 4.77 3.16 slimfinder#15120800001#2#Q.[ST]..SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#20#K..Q..[IL]..FF LIG_PCNA_PIPBox_1_a K..Q..[IL]..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.719 3.668 4.77 3.16 slimfinder#15120800001#20#K..Q..[IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#22#[KR]Q..L..FF LIG_PCNA_PIPBox_1_a [KR]Q..L..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.680 3.668 4.77 3.16 slimfinder#15120800001#22#[KR]Q..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#22#[KR]Q..L..FF LIG_PCNA_PIPBox_1_b [KR]Q..L..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [kr]q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.601 0.378 1.803 4.77 3.16 slimfinder#15120800001#22#[KR]Q..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#23#Q.TL..F LIG_PCNA_PIPBox_1_a Q.TL..F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 2.341 0.740 0.559 2.962 4.00 3.16 slimfinder#15120800001#23#Q.TL..F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#24#Q.TL.S.F LIG_PCNA_PIPBox_1_a Q.TL.S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.512 0.794 0.444 3.972 5.00 3.16 slimfinder#15120800001#24#Q.TL.S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#26#Q.TL.SF LIG_PCNA_PIPBox_1_a Q.TL.SF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 5 2.512 0.794 0.501 3.972 5.00 3.16 slimfinder#15120800001#26#Q.TL.SF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#27#[ST][IL]..FF LIG_PCNA_PIPBox_1_a [ST][IL]..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.530 2.498 3.54 3.16 slimfinder#15120800001#27#[ST][IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#27#[ST][IL]..FF LIG_PCNA_PIPBox_1_b [ST][IL]..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.530 2.498 3.54 3.16 slimfinder#15120800001#27#[ST][IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#28#Q..I..FF LIG_PCNA_PIPBox_1_a Q..I..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.680 3.668 4.00 3.16 slimfinder#15120800001#28#Q..I..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#28#Q..I..FF LIG_PCNA_PIPBox_1_b Q..I..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.601 0.446 1.803 4.00 3.16 slimfinder#15120800001#28#Q..I..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#29#Q.[ST]..S.F LIG_PCNA_PIPBox_1_a Q.[ST]..S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.878 0.594 0.372 2.376 3.77 3.16 slimfinder#15120800001#29#Q.[ST]..S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#3#Q.[ST][IL]..FF LIG_PCNA_PIPBox_1_a Q.[ST][IL]..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.974 0.941 0.629 4.703 4.54 3.16 slimfinder#15120800001#3#Q.[ST][IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#3#Q.[ST][IL]..FF LIG_PCNA_PIPBox_1_b Q.[ST][IL]..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.418 2.498 4.54 3.16 slimfinder#15120800001#3#Q.[ST][IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#30#[KR]..TL..FF LIG_PCNA_PIPBox_1_a [KR]..TL..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.381 2.498 4.77 3.16 slimfinder#15120800001#30#[KR]..TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#30#[KR]..TL..FF LIG_PCNA_PIPBox_1_b [KR]..TL..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [kr]..[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.398 2.498 4.77 3.16 slimfinder#15120800001#30#[KR]..TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#31#Q.[ST]..SF LIG_PCNA_PIPBox_1_a Q.[ST]..SF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 1.878 0.594 0.425 2.376 3.77 3.16 slimfinder#15120800001#31#Q.[ST]..SF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#32#L.SFF LIG_PCNA_PIPBox_1_a L.SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.515 2.619 4.00 3.16 slimfinder#15120800001#32#L.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#32#L.SFF LIG_PCNA_PIPBox_1_b L.SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.070 0.655 0.515 2.619 4.00 3.16 slimfinder#15120800001#32#L.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#33#Q.T..S.F LIG_PCNA_PIPBox_1_a Q.T..S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.878 0.594 0.355 2.376 4.00 3.16 slimfinder#15120800001#33#Q.T..S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#34#I..FF.{1#2}K LIG_PCNA_PIPBox_1_a I..FF.{1,2}K Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy].k 3 1.900 0.601 0.454 1.803 4.00 3.16 slimfinder#15120800001#34#I..FF.{1#2}K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#34#I..FF.{1#2}K LIG_PCNA_PIPBox_1_b I..FF.{1,2}K ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy].k 3 1.900 0.601 0.454 1.803 4.00 3.16 slimfinder#15120800001#34#I..FF.{1#2}K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#35#Q.[ST][IL]..F LIG_PCNA_PIPBox_1_a Q.[ST][IL]..F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 2.341 0.740 0.628 2.962 3.54 3.16 slimfinder#15120800001#35#Q.[ST][IL]..F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#36#[KR]Q.TL..F LIG_PCNA_PIPBox_1_a [KR]Q.TL..F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 2.341 0.740 0.559 2.962 4.77 3.16 slimfinder#15120800001#36#[KR]Q.TL..F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#37#Q.T.{1#2}S.{0#1}FF LIG_PCNA_PIPBox_1_a Q.T.{1,2}S.{0,1}FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.512 0.794 0.444 3.972 5.00 3.16 slimfinder#15120800001#37#Q.T.{1#2}S.{0#1}FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#38#[ILM]..F[FY] LIG_PCNA_PIPBox_1_a [ILM]..F[FY] Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ILM][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.791 0.734 2.373 2.40 3.16 slimfinder#15120800001#38#[ILM]..F[FY] The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#38#[ILM]..F[FY] LIG_PCNA_PIPBox_1_b [ILM]..F[FY] ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ILM][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.791 0.734 2.373 2.40 3.16 slimfinder#15120800001#38#[ILM]..F[FY] The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#39#[IL]..FF LIG_PCNA_PIPBox_1_a [IL]..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.686 0.643 2.059 2.77 3.16 slimfinder#15120800001#39#[IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#39#[IL]..FF LIG_PCNA_PIPBox_1_b [IL]..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.686 0.643 2.059 2.77 3.16 slimfinder#15120800001#39#[IL]..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#4#Q.TL..FF LIG_PCNA_PIPBox_1_a Q.TL..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.974 0.941 0.573 4.703 5.00 3.16 slimfinder#15120800001#4#Q.TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#4#Q.TL..FF LIG_PCNA_PIPBox_1_b Q.TL..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.381 2.498 5.00 3.16 slimfinder#15120800001#4#Q.TL..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#42#I..FF..K LIG_PCNA_PIPBox_1_a I..FF..K Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap [ilm][^p][acdegkmnqrst][fhm][fmy].. 3 1.900 0.601 0.596 1.803 4.00 3.16 slimfinder#15120800001#42#I..FF..K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#42#I..FF..K LIG_PCNA_PIPBox_1_b I..FF..K ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap [ilm][^p][acdegkmnqrst][fhm][fmy].. 3 1.900 0.601 0.596 1.803 4.00 3.16 slimfinder#15120800001#42#I..FF..K The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#43#Q.SI..FF LIG_PCNA_PIPBox_1_a Q.SI..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.974 0.941 0.573 4.703 5.00 3.16 slimfinder#15120800001#43#Q.SI..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#43#Q.SI..FF LIG_PCNA_PIPBox_1_b Q.SI..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.974 0.624 0.381 2.498 5.00 3.16 slimfinder#15120800001#43#Q.SI..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#44#Q.T.{1#2}S.F LIG_PCNA_PIPBox_1_a Q.T.{1,2}S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 1.878 0.594 0.355 2.376 4.00 3.16 slimfinder#15120800001#44#Q.T.{1#2}S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#45#Q.T..S.{0#1}F LIG_PCNA_PIPBox_1_a Q.T..S.{0,1}F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 4 1.878 0.594 0.404 2.376 4.00 3.16 slimfinder#15120800001#45#Q.T..S.{0#1}F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#46#L..FF LIG_PCNA_PIPBox_1_a L..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.633 0.596 1.900 3.00 3.16 slimfinder#15120800001#46#L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#46#L..FF LIG_PCNA_PIPBox_1_b L..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.633 0.596 1.900 3.00 3.16 slimfinder#15120800001#46#L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#47#[ILMV]..F[FY] LIG_PCNA_PIPBox_1_a [ILMV]..F[FY] Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilmv][^p][acdegkmnqrst][fhm][fmy] 3 1.804 0.782 0.697 2.347 2.31 3.16 slimfinder#15120800001#47#[ILMV]..F[FY] The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#47#[ILMV]..F[FY] LIG_PCNA_PIPBox_1_b [ILMV]..F[FY] ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilmv][^p][acdegkmnqrst][fhm][fmy] 3 1.804 0.782 0.697 2.347 2.31 3.16 slimfinder#15120800001#47#[ILMV]..F[FY] The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#48#I..FF LIG_PCNA_PIPBox_1_a I..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.633 0.596 1.900 3.00 3.16 slimfinder#15120800001#48#I..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#48#I..FF LIG_PCNA_PIPBox_1_b I..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.633 0.596 1.900 3.00 3.16 slimfinder#15120800001#48#I..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#49#KQ..L..FF LIG_PCNA_PIPBox_1_a KQ..L..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Overlap Complex Overlap Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.680 3.668 5.00 3.16 slimfinder#15120800001#49#KQ..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#49#KQ..L..FF LIG_PCNA_PIPBox_1_b KQ..L..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent kq.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.601 0.361 1.803 5.00 3.16 slimfinder#15120800001#49#KQ..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#5#Q..L..FF LIG_PCNA_PIPBox_1_a Q..L..FF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 4 2.900 0.917 0.680 3.668 4.00 3.16 slimfinder#15120800001#5#Q..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#5#Q..L..FF LIG_PCNA_PIPBox_1_b Q..L..FF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 3 1.900 0.601 0.446 1.803 4.00 3.16 slimfinder#15120800001#5#Q..L..FF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#50#Q..L..F LIG_PCNA_PIPBox_1_a Q..L..F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 3 2.267 0.756 0.695 2.267 3.00 3.16 slimfinder#15120800001#50#Q..L..F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#6#[ST][IL].SFF LIG_PCNA_PIPBox_1_a [ST][IL].SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.471 3.392 4.54 3.16 slimfinder#15120800001#6#[ST][IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#6#[ST][IL].SFF LIG_PCNA_PIPBox_1_b [ST][IL].SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.471 3.392 4.54 3.16 slimfinder#15120800001#6#[ST][IL].SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#7#TL.SFF LIG_PCNA_PIPBox_1_a TL.SFF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.428 3.392 5.00 3.16 slimfinder#15120800001#7#TL.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#7#TL.SFF LIG_PCNA_PIPBox_1_b TL.SFF ^.{0,3}.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent [^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.145 0.678 0.428 3.392 5.00 3.16 slimfinder#15120800001#7#TL.SFF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 2/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#8#Q.[ST][IL].S.F LIG_PCNA_PIPBox_1_a Q.[ST][IL].S.F Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm][fmy] 5 2.512 0.794 0.484 3.972 4.54 3.16 slimfinder#15120800001#8#Q.[ST][IL].S.F The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
comparimotif LIG_PCNA_PIPBox_1 slimfinder#15120800001#9#Q.[ST][IL].SF LIG_PCNA_PIPBox_1_a Q.[ST][IL].SF Q.[^FHWY][ILM][^P][^FHILVWYP][HFM][FMY].. Complex Subsequence Complex Parent Q.[^fhwy][ilm][^p][acdegkmnqrst][fhm] 5 2.512 0.794 0.551 3.972 4.54 3.16 slimfinder#15120800001#9#Q.[ST][IL].SF The PCNA binding PIP box motif is found in proteins involved in DNA replication, repair and cell cycle control. [18 ELM instances] variant 1/2
#~~# #~+~~+~# #~~#
#LOG 00:00:00 Activity Log for SLiMSuite V1.5.2: Wed Dec 9 00:31:45 2015
#DIR 00:00:00 Run from directory: /srv/slimsuite/logs/prod
#ARG 00:00:00 Commandline arguments: run ip=129.94.133.155 comparimotif&motifs=jobid:15120800001:main&searchdb=LIG_PCNA_PIPBox_1&jobid=15120900004
#VIO 00:00:00 Verbosity: -1; Interactivity: -1.
#PROG 00:00:00 CompariMotif V3.13.0: Motif vs Motif Comparison
#CMD 00:00:00 Full CompariMotif CmdList: proglog=F iucut=0.2 usegopher=T protscores=T megablam=F orthdb=qfo_ref.2015-04.Eukaryota.fas sourcedate=2015-04-15 walltime=0 maxgapx=3 motific=T ambcut=0 backups=F rest=format motifs=comparimotif.motifs searchdb=LIG_PCNA_PIPBox_1.motif jobid=15120900004 basefile=comparimotif
#DB 00:00:00 /srv/slimsuite/data/orthdb/qfo_ref.2015-04/qfo_ref.2015-04.Eukaryota.fas already formatted. (Force = False).
#MOT 00:00:00 50 motifs read from /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.motifs (51 lines): 50 retained.
#DB 00:00:00 /srv/slimsuite/data/orthdb/qfo_ref.2015-04/qfo_ref.2015-04.Eukaryota.fas already formatted. (Force = False).
#SPLIT 00:00:00 Found /srv/slimsuite/data/elm2015/ELM_Classes/LIG_PCNA_PIPBox_1.split.motifs. Will load instead.
#MOT 00:00:00 2 motifs read from /srv/slimsuite/data/elm2015/ELM_Classes/LIG_PCNA_PIPBox_1.split.motifs (2 lines): 2 retained.
#COMP 00:00:00 Comparing MotifFile & SearchDB: 100 comparisons made.
#COMP 00:00:00 73 motif matches output to /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.compare.tdt. Rank by "Score" column.
#COMP 00:00:00 4 input motifs unmatched.
#XGMML 00:00:00 Output of XGMML file /srv/slimsuite/scratch/prod/comparimotif/15120900004/comparimotif.compare.xgmml for Cytoscape complete.
#LOG 00:00:00 CompariMotif V3.13.0 End: Wed Dec 9 00:31:46 2015
#JOBID 00:00:00 15120900004
#REST 00:00:00 URL for future retrieval: http://rest.slimsuite.unsw.edu.au/retrieve&jobid=15120900004&rest=format&password=None
0 warning messages.

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.