|
SLiMSuite REST Server |
| Links |
|---|
| REST Home |
| EdwardsLab Homepage |
| EdwardsLab Blog |
| SLiMSuite Blog |
| SLiMSuite |
| Webservers |
| Genomes |
| REST Pages |
| REST Status |
| REST Help |
| REST Tools |
| REST Alias Data |
| REST API |
| REST News |
| REST Sitemap |
SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: blaste
Option Type: X
Modules: orcfinder patis revert qslimfinder_V1.9 slimfinder_V4.9 slimprob_V1.4 rje_blast_V1 rje_blast_V2 rje_blast rje_slimcore gablam haqesac qslimfinder seqmapper slimfinder slimprob slimsearch
| Module | Option | Description | Default |
|---|---|---|---|
| gablam | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| haqesac | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| orcfinder | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| patis | blaste=X |
E-value cut-off for BLAST search | 1e-10 |
| qslimfinder | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| qslimfinder_V1.9 | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| revert | blaste=X |
BLAST evalue cut-off | 1e-10 |
| rje_blast | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| rje_blast_V1 | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| rje_blast_V2 | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| rje_slimcore | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| seqmapper | blaste=X |
E-Value cut-off for BLAST searches (BLAST -e X) | 1e-4 |
| slimfinder | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| slimfinder_V4.9 | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| slimprob | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| slimprob_V1.4 | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
| slimsearch | blaste=X |
BLAST e-value threshold for determining relationships | 1e=4 |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.