SLiMSuite REST Server

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SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

cmd: blastf

Option Type: T/F

Modules: orcfinder qslimfinder_V1.9 slimfinder_V4.9 slimprob_V1.4 rje_blast_V1 rje_blast_V2 rje_blast rje_slimcore gablam haqesac qslimfinder seqmapper slimfinder slimprob slimsearch

Module	Option	Description	Default
gablam	`blastf=T/F`	Complexity Filter (BLAST -F X)	`False`
haqesac	`blastf=T/F`	Complexity Filter (BLAST -F X)	`True`
orcfinder	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
qslimfinder	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
qslimfinder_V1.9	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
rje_blast	`blastf=T/F`	Complexity Filter (BLAST -F X)	`True`
rje_blast_V1	`blastf=T/F`	Complexity Filter (BLAST -F X)	`True`
rje_blast_V2	`blastf=T/F`	Complexity Filter (BLAST -F X)	`True`
rje_slimcore	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
seqmapper	`blastf=T/F`	Complexity Filter (BLAST -F X)	`False`
slimfinder	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
slimfinder_V4.9	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
slimprob	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
slimprob_V1.4	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`
slimsearch	`blastf=T/F`	Use BLAST Complexity filter when determining relationships	`True`

© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.