SLiMSuite REST Server

SLiMSuite Documentation

Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.

Option Type: FILE T/F

Modules: rje_dbase rje_ensembl rje_genecards rje_genemap pingu_V3

Module	Option	Description	Default
pingu_V3	`ensloci=FILE`	File of EnsEMBL genome EnsLoci treatment
rje_dbase	`ensloci=T/F`	Reduce EnsEMBL to a single protein per locus, mapping UniProt where possible	`True`
rje_ensembl	`ensloci=T/F`	Create EnsEMBL datasets "reduced by loci"	`False`
rje_genecards	`ensloci=FILE`	File of EnsLoci genome to incorporate	`/home/richard/Databases/EnsEMBL/ens_HUMAN.loci.fas`
rje_genemap	`ensloci=FILE`	File of EnsLoci genome to incorporate	`None`