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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: tmhmm
Option Type: FILE
Modules: compass rje_ensembl rje_tm unifake
| Module | Option | Description | Default |
|---|---|---|---|
| compass | tmhmm=FILE |
Transmembrane topology data in TMHMM single-line format | *.tmhmm |
| rje_ensembl | tmhmm=FILE |
Path to TMHMM program | /home/richard/Bioware/TMHMM2.0c/bin/tmhmm |
| rje_tm | tmhmm=FILE |
TMHMM output file | None |
| unifake | tmhmm=FILE |
Path to TMHMM program | None |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.