Tranmembrane and Signal Peptide Prediction Module
Copyright © 2005 Richard J. Edwards - See source code for GNU License Notice
Will read in results from tmhmm and/or signalp files as appropriate and append output to: - tm.tdt = TM domain counts and orientation - domains.tdt = Domain table - singalp.tdt = SingalP data (use to add signal peptide domains to domains table using mySQL
History Module Version History
# 0.0 - Initial Compilation. # 1.0 - Basic functional version. # 1.1 - Output of 'truncated' proteins - cleaved signalp peptides replaced with Xs. # 1.2 - Added standalone parsing methods as first step in development (& for rje_ensembl.ensDat())
© 2015 RJ Edwards. Contact: email@example.com.