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SLiMSuite Documentation
Please note that command documentation sometimes lags behind the latest module versions. Click on module names to check current documentation.
cmd: sigcut
Option Type: [?]{docs:?} LIST X
Modules: humsf10 rje_misc slimbench_V1 slimfinder_V4.9 rje_samtools slimbench slimfinder
| Module | Option | Description | Default |
|---|---|---|---|
| humsf10 | sigcut=X |
Significance cut-off for analyses | 0.01 |
| rje_misc | [sigcut=?]{docs:?} |
? |
|
| rje_samtools | sigcut=X |
Significance cutoff for enriched treatment SNPs | 0.05 |
| slimbench | sigcut=LIST |
Significance thresholds to use for assessment | 0.1,0.05,0.01,0.001,0.0001 |
| slimbench_V1 | sigcut=LIST |
Significance thresholds to use for assessment | 0.05,0.01,0.001,0.0001 |
| slimfinder | [sigcut=?]{docs:?} |
? |
|
| slimfinder_V4.9 | [sigcut=?]{docs:?} |
? |
© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.