Module: rje_motif_stats Description: Motif Statistics Methods Module Version: 1.0 Last Edit: 01/02/07

Copyright © 2007 Richard J. Edwards - See source code for GNU License Notice

Imported modules: gopher_V2 rje rje_disorder rje_motif_V3 rje_seq rje_sequence rje_blast_V1

See SLiMSuite Blog for further documentation. See rje for general commands.

Function

This module contains the Alignment Conservation methods for motifs, as well as other calculations needing occurrence data. This module is designed to be used by the MotifList class, which contains the relevant commandline options.

Commandline

This module is not for standalone running and has no commandline options (including 'help'). All options are handled
by the parent module.

History Module Version History

    # 1.0 - Initial compilation based of rje_motif_cons V1.1.