Yeast PPI & Sequence Module
Copyright © 2008 Richard J. Edwards - See source code for GNU License Notice
This Yeast SLiMFinder Analysis Module is designed to read, assess, store and combine the different yeast information for SLiMFinder analysis, using the YGOB for generating alignments for conservation masking etc.
The main (default) inputs are: - Y2H_union.txt = High quality binary interactions from Vidal lab - Pillars.tab = YGOB orthology pillars for yeast species - Proteins.fas = Fasta file of protein sequences to match pillars.tab
See also rje.py generic commandline options.
History Module Version History
# 0.0 - Initial Compilation.
© 2015 RJ Edwards. Contact: email@example.com.